dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002966_71|CGC1
Gene ID: MGYG000002966_03640
Location and strand information: 44 - 1618 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0596
Protein molecular weight: 59261
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002966_71|CGC1
Gene ID: MGYG000002966_03641
Location and strand information: 1711 - 3327 (+)
Family: GH43_12
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 4.7604
Protein molecular weight: 61286.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002966_71|CGC1
Gene ID: MGYG000002966_03642
Location and strand information: 3359 - 3700 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002966_71|CGC1
Gene ID: MGYG000002966_03643
Location and strand information: 3901 - 5472 (+)
Family: 3.A.1.5.1
Protein type: TC
Protein description: putative D,D-dipeptide-binding periplasmic protein DdpA

Gene clsuter ID: MGYG000002966_71|CGC1
Gene ID: MGYG000002966_03644
Location and strand information: 5629 - 6594 (+)
Family: 3.A.1.5.11
Protein type: TC
Protein description: Glutathione transport system permease protein GsiC

Gene clsuter ID: MGYG000002966_71|CGC1
Gene ID: MGYG000002966_03645
Location and strand information: 6609 - 7517 (+)
Family: 3.A.1.5.11
Protein type: TC
Protein description: Glutathione transport system permease protein GsiD

Gene clsuter ID: MGYG000002966_71|CGC1
Gene ID: MGYG000002966_03646
Location and strand information: 7532 - 8512 (+)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000002966_71|CGC1
Gene ID: MGYG000002966_03647
Location and strand information: 8513 - 9475 (+)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000002966_71|CGC1
Gene ID: MGYG000002966_03648
Location and strand information: 9569 - 11968 (+)
Family: GH39
Protein type: CAZyme
Protein description: HTH-type transcriptional activator RhaS
Protein isoelectric point: 6.1682
Protein molecular weight: 93762.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002966_03640	hypothetical protein	CAZyme	44	1618	+	GH106
MGYG000002966_03641	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	1711	3327	+	GH43_12
MGYG000002966_03642	hypothetical protein	null	3359	3700	+	SnoaL
MGYG000002966_03643	putative D,D-dipeptide-binding periplasmic protein DdpA	TC	3901	5472	+	3.A.1.5.1
MGYG000002966_03644	Glutathione transport system permease protein GsiC	TC	5629	6594	+	3.A.1.5.11
MGYG000002966_03645	Glutathione transport system permease protein GsiD	TC	6609	7517	+	3.A.1.5.11
MGYG000002966_03646	Oligopeptide transport ATP-binding protein OppD	TC	7532	8512	+	3.A.1.5.20
MGYG000002966_03647	Oligopeptide transport ATP-binding protein OppF	TC	8513	9475	+	3.A.1.5.20
MGYG000002966_03648	HTH-type transcriptional activator RhaS	CAZyme	9569	11968	+	GH39
Protein ID	Protein Name	Type	Start	End	Strand	Signature